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algorithms fiji github  (Oxford Instruments)


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    Structured Review

    Oxford Instruments algorithms fiji github
    Algorithms Fiji Github, supplied by Oxford Instruments, used in various techniques. Bioz Stars score: 99/100, based on 44266 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/algorithms+fiji+github/Imaris/pm41197634-204-174-178
    Average 99 stars, based on 44266 article reviews
    algorithms fiji github - by Bioz Stars, 2026-09
    99/100 stars

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    Related Articles

    Recombinant:

    Article Title: Molecular delineation of a retina-dependent photoneuroendocrine pathway in zebrafish.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Chemicals, peptides, and recombinant proteins Ronidazole Sigma-Aldrich CAS-Nummer: 25535-16-4 Tricaine Merck CAS Number: 886-86-2 crRNA IDT Alt-R CRISPR-Cas9 crRNA tracrRNA IDT CAT# 1072533 Duplex buffer IDT CAT# 11-05-01-12 Cas9 protein IDT CAT# 1081060 1-phenyl 2-thiourea (PTU) Merck CAS Number:103855 Experimental models: Organisms/strains Danio rerio: Tg(pmchl:gal4) mpn418 This study ZDB-ALT-211221-8 Danio rerio: Tg(pmch:gal4) mpn419 This study ZDB-ALT-250331-7 Danio rerio: Tg(onecut1:QF2) mpn434 This study ZDB-ALT-250331-16 Danio rerio: Tg(eomesa:QF2) mpn406 Kölsch et al.11 ZDB-ALT-211118-6 Danio rerio: Tg(QUAS:switch-NTR) mpn168 Kölsch et al.11 ZDB-ALT-211118-10 Danio rerio: Tg(atoh7:cre) mpn221 Förster et al.21 ZDB-ALT-170908-22 Danio rerio: Tg(elavl3:nlsGCamp6s) mpn400 Förster et al.21 ZDB-ALT-170731-37 Oligonucleotides pmchl_prom5kb.Fwd: CGCAGCAACACA CCTAAAATACACAATTG This study N/A pmchl_Ex1.Rev: GAGATGTCAGGGTCC TCAGGAGATTGG This study N/A pmch_prom_Fwd: GCAGCAGTTTCCC ATCTGCTGGTTAAG This study N/A pmch_prom.Rev: GTAGGAAGATGCC ATGATCTTCGGCTG This study N/A onecut1 CRISPR target: CCATGCGCG CTCCATGGGC This study N/A Gene-specific HCR Probe Sets for pmch, pmchl, pomca, opn4b, opn4xa, onecut1 and eomesa Molecular Instruments NA HCR amplifier Alexa Fluor 546 Molecular Instruments SO49023 HCR amplifier Alexa Fluor 647 Molecular Instruments SO14525 Recombinant DNA pTol2-QUAS:loxP_epNTR-RFP_loxP_GFPcaax Kölsch et al.11 N/A Software and algorithms Fiji Github https://imagej.nih.gov/ij/ Imaris 10.2 Oxford Instruments https://imaris.oxinst.com/ ll OPEN ACCESS e1 Current Biology 35, 1–7.e1–e3, December 1, 2025 Report Generation of pmch:Gal4 and pmchl:Gal4 transgenic lines The Tg(pmch:gal4) and Tg(pmchl:gal4) zebrafish lines were generated by amplifying roughly 5 kb of the promoter regions of pmch (ZDB-GENE-041210-150) and pmchl (ZDB-GENE-030131-7863) genes, 5′ from the ATG start codon.

    CRISPR:

    Article Title: Molecular delineation of a retina-dependent photoneuroendocrine pathway in zebrafish.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Chemicals, peptides, and recombinant proteins Ronidazole Sigma-Aldrich CAS-Nummer: 25535-16-4 Tricaine Merck CAS Number: 886-86-2 crRNA IDT Alt-R CRISPR-Cas9 crRNA tracrRNA IDT CAT# 1072533 Duplex buffer IDT CAT# 11-05-01-12 Cas9 protein IDT CAT# 1081060 1-phenyl 2-thiourea (PTU) Merck CAS Number:103855 Experimental models: Organisms/strains Danio rerio: Tg(pmchl:gal4) mpn418 This study ZDB-ALT-211221-8 Danio rerio: Tg(pmch:gal4) mpn419 This study ZDB-ALT-250331-7 Danio rerio: Tg(onecut1:QF2) mpn434 This study ZDB-ALT-250331-16 Danio rerio: Tg(eomesa:QF2) mpn406 Kölsch et al.11 ZDB-ALT-211118-6 Danio rerio: Tg(QUAS:switch-NTR) mpn168 Kölsch et al.11 ZDB-ALT-211118-10 Danio rerio: Tg(atoh7:cre) mpn221 Förster et al.21 ZDB-ALT-170908-22 Danio rerio: Tg(elavl3:nlsGCamp6s) mpn400 Förster et al.21 ZDB-ALT-170731-37 Oligonucleotides pmchl_prom5kb.Fwd: CGCAGCAACACA CCTAAAATACACAATTG This study N/A pmchl_Ex1.Rev: GAGATGTCAGGGTCC TCAGGAGATTGG This study N/A pmch_prom_Fwd: GCAGCAGTTTCCC ATCTGCTGGTTAAG This study N/A pmch_prom.Rev: GTAGGAAGATGCC ATGATCTTCGGCTG This study N/A onecut1 CRISPR target: CCATGCGCG CTCCATGGGC This study N/A Gene-specific HCR Probe Sets for pmch, pmchl, pomca, opn4b, opn4xa, onecut1 and eomesa Molecular Instruments NA HCR amplifier Alexa Fluor 546 Molecular Instruments SO49023 HCR amplifier Alexa Fluor 647 Molecular Instruments SO14525 Recombinant DNA pTol2-QUAS:loxP_epNTR-RFP_loxP_GFPcaax Kölsch et al.11 N/A Software and algorithms Fiji Github https://imagej.nih.gov/ij/ Imaris 10.2 Oxford Instruments https://imaris.oxinst.com/ ll OPEN ACCESS e1 Current Biology 35, 1–7.e1–e3, December 1, 2025 Report Generation of pmch:Gal4 and pmchl:Gal4 transgenic lines The Tg(pmch:gal4) and Tg(pmchl:gal4) zebrafish lines were generated by amplifying roughly 5 kb of the promoter regions of pmch (ZDB-GENE-041210-150) and pmchl (ZDB-GENE-030131-7863) genes, 5′ from the ATG start codon.

    Software:

    Article Title: Molecular delineation of a retina-dependent photoneuroendocrine pathway in zebrafish.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Chemicals, peptides, and recombinant proteins Ronidazole Sigma-Aldrich CAS-Nummer: 25535-16-4 Tricaine Merck CAS Number: 886-86-2 crRNA IDT Alt-R CRISPR-Cas9 crRNA tracrRNA IDT CAT# 1072533 Duplex buffer IDT CAT# 11-05-01-12 Cas9 protein IDT CAT# 1081060 1-phenyl 2-thiourea (PTU) Merck CAS Number:103855 Experimental models: Organisms/strains Danio rerio: Tg(pmchl:gal4) mpn418 This study ZDB-ALT-211221-8 Danio rerio: Tg(pmch:gal4) mpn419 This study ZDB-ALT-250331-7 Danio rerio: Tg(onecut1:QF2) mpn434 This study ZDB-ALT-250331-16 Danio rerio: Tg(eomesa:QF2) mpn406 Kölsch et al.11 ZDB-ALT-211118-6 Danio rerio: Tg(QUAS:switch-NTR) mpn168 Kölsch et al.11 ZDB-ALT-211118-10 Danio rerio: Tg(atoh7:cre) mpn221 Förster et al.21 ZDB-ALT-170908-22 Danio rerio: Tg(elavl3:nlsGCamp6s) mpn400 Förster et al.21 ZDB-ALT-170731-37 Oligonucleotides pmchl_prom5kb.Fwd: CGCAGCAACACA CCTAAAATACACAATTG This study N/A pmchl_Ex1.Rev: GAGATGTCAGGGTCC TCAGGAGATTGG This study N/A pmch_prom_Fwd: GCAGCAGTTTCCC ATCTGCTGGTTAAG This study N/A pmch_prom.Rev: GTAGGAAGATGCC ATGATCTTCGGCTG This study N/A onecut1 CRISPR target: CCATGCGCG CTCCATGGGC This study N/A Gene-specific HCR Probe Sets for pmch, pmchl, pomca, opn4b, opn4xa, onecut1 and eomesa Molecular Instruments NA HCR amplifier Alexa Fluor 546 Molecular Instruments SO49023 HCR amplifier Alexa Fluor 647 Molecular Instruments SO14525 Recombinant DNA pTol2-QUAS:loxP_epNTR-RFP_loxP_GFPcaax Kölsch et al.11 N/A Software and algorithms Fiji Github https://imagej.nih.gov/ij/ Imaris 10.2 Oxford Instruments https://imaris.oxinst.com/ ll OPEN ACCESS e1 Current Biology 35, 1–7.e1–e3, December 1, 2025 Report Generation of pmch:Gal4 and pmchl:Gal4 transgenic lines The Tg(pmch:gal4) and Tg(pmchl:gal4) zebrafish lines were generated by amplifying roughly 5 kb of the promoter regions of pmch (ZDB-GENE-041210-150) and pmchl (ZDB-GENE-030131-7863) genes, 5′ from the ATG start codon.

    Transgenic Assay:

    Article Title: Molecular delineation of a retina-dependent photoneuroendocrine pathway in zebrafish.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Chemicals, peptides, and recombinant proteins Ronidazole Sigma-Aldrich CAS-Nummer: 25535-16-4 Tricaine Merck CAS Number: 886-86-2 crRNA IDT Alt-R CRISPR-Cas9 crRNA tracrRNA IDT CAT# 1072533 Duplex buffer IDT CAT# 11-05-01-12 Cas9 protein IDT CAT# 1081060 1-phenyl 2-thiourea (PTU) Merck CAS Number:103855 Experimental models: Organisms/strains Danio rerio: Tg(pmchl:gal4) mpn418 This study ZDB-ALT-211221-8 Danio rerio: Tg(pmch:gal4) mpn419 This study ZDB-ALT-250331-7 Danio rerio: Tg(onecut1:QF2) mpn434 This study ZDB-ALT-250331-16 Danio rerio: Tg(eomesa:QF2) mpn406 Kölsch et al.11 ZDB-ALT-211118-6 Danio rerio: Tg(QUAS:switch-NTR) mpn168 Kölsch et al.11 ZDB-ALT-211118-10 Danio rerio: Tg(atoh7:cre) mpn221 Förster et al.21 ZDB-ALT-170908-22 Danio rerio: Tg(elavl3:nlsGCamp6s) mpn400 Förster et al.21 ZDB-ALT-170731-37 Oligonucleotides pmchl_prom5kb.Fwd: CGCAGCAACACA CCTAAAATACACAATTG This study N/A pmchl_Ex1.Rev: GAGATGTCAGGGTCC TCAGGAGATTGG This study N/A pmch_prom_Fwd: GCAGCAGTTTCCC ATCTGCTGGTTAAG This study N/A pmch_prom.Rev: GTAGGAAGATGCC ATGATCTTCGGCTG This study N/A onecut1 CRISPR target: CCATGCGCG CTCCATGGGC This study N/A Gene-specific HCR Probe Sets for pmch, pmchl, pomca, opn4b, opn4xa, onecut1 and eomesa Molecular Instruments NA HCR amplifier Alexa Fluor 546 Molecular Instruments SO49023 HCR amplifier Alexa Fluor 647 Molecular Instruments SO14525 Recombinant DNA pTol2-QUAS:loxP_epNTR-RFP_loxP_GFPcaax Kölsch et al.11 N/A Software and algorithms Fiji Github https://imagej.nih.gov/ij/ Imaris 10.2 Oxford Instruments https://imaris.oxinst.com/ ll OPEN ACCESS e1 Current Biology 35, 1–7.e1–e3, December 1, 2025 Report Generation of pmch:Gal4 and pmchl:Gal4 transgenic lines The Tg(pmch:gal4) and Tg(pmchl:gal4) zebrafish lines were generated by amplifying roughly 5 kb of the promoter regions of pmch (ZDB-GENE-041210-150) and pmchl (ZDB-GENE-030131-7863) genes, 5′ from the ATG start codon.

    Generated:

    Article Title: Molecular delineation of a retina-dependent photoneuroendocrine pathway in zebrafish.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Chemicals, peptides, and recombinant proteins Ronidazole Sigma-Aldrich CAS-Nummer: 25535-16-4 Tricaine Merck CAS Number: 886-86-2 crRNA IDT Alt-R CRISPR-Cas9 crRNA tracrRNA IDT CAT# 1072533 Duplex buffer IDT CAT# 11-05-01-12 Cas9 protein IDT CAT# 1081060 1-phenyl 2-thiourea (PTU) Merck CAS Number:103855 Experimental models: Organisms/strains Danio rerio: Tg(pmchl:gal4) mpn418 This study ZDB-ALT-211221-8 Danio rerio: Tg(pmch:gal4) mpn419 This study ZDB-ALT-250331-7 Danio rerio: Tg(onecut1:QF2) mpn434 This study ZDB-ALT-250331-16 Danio rerio: Tg(eomesa:QF2) mpn406 Kölsch et al.11 ZDB-ALT-211118-6 Danio rerio: Tg(QUAS:switch-NTR) mpn168 Kölsch et al.11 ZDB-ALT-211118-10 Danio rerio: Tg(atoh7:cre) mpn221 Förster et al.21 ZDB-ALT-170908-22 Danio rerio: Tg(elavl3:nlsGCamp6s) mpn400 Förster et al.21 ZDB-ALT-170731-37 Oligonucleotides pmchl_prom5kb.Fwd: CGCAGCAACACA CCTAAAATACACAATTG This study N/A pmchl_Ex1.Rev: GAGATGTCAGGGTCC TCAGGAGATTGG This study N/A pmch_prom_Fwd: GCAGCAGTTTCCC ATCTGCTGGTTAAG This study N/A pmch_prom.Rev: GTAGGAAGATGCC ATGATCTTCGGCTG This study N/A onecut1 CRISPR target: CCATGCGCG CTCCATGGGC This study N/A Gene-specific HCR Probe Sets for pmch, pmchl, pomca, opn4b, opn4xa, onecut1 and eomesa Molecular Instruments NA HCR amplifier Alexa Fluor 546 Molecular Instruments SO49023 HCR amplifier Alexa Fluor 647 Molecular Instruments SO14525 Recombinant DNA pTol2-QUAS:loxP_epNTR-RFP_loxP_GFPcaax Kölsch et al.11 N/A Software and algorithms Fiji Github https://imagej.nih.gov/ij/ Imaris 10.2 Oxford Instruments https://imaris.oxinst.com/ ll OPEN ACCESS e1 Current Biology 35, 1–7.e1–e3, December 1, 2025 Report Generation of pmch:Gal4 and pmchl:Gal4 transgenic lines The Tg(pmch:gal4) and Tg(pmchl:gal4) zebrafish lines were generated by amplifying roughly 5 kb of the promoter regions of pmch (ZDB-GENE-041210-150) and pmchl (ZDB-GENE-030131-7863) genes, 5′ from the ATG start codon.



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    Oxford Instruments algorithms fiji github
    Algorithms Fiji Github, supplied by Oxford Instruments, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/algorithms+fiji+github/Imaris/pm41197634-204-174-178
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    algorithms fiji github - by Bioz Stars, 2026-09
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